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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53276552_53278187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53276552 - 53278187

Intron Length:

1636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TAGTGTCTAACT

Flanking Amino Acid:

KLEAKVKKLEEAATKHSQDF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

76.5

0.6

78.1

27.9

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

51.4

0.12

2.1

73.56

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489