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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53278578_53278664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53278578 - 53278664

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TACTTCTCAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TACTTCTCAATA

Flanking Amino Acid:

DGVLKEKCRKVKHAETQSSS

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

70.4

0.46

0.9

66.7

Minor 5ss

-0.6

2.5

52.7

Minor BPS

62.2

0.38

1.5

68.21

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023616

53267342 - 53298830

31489

ENSAPLT00000044853

53266427 - 53298830

32404