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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53278722_53279771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53278722 - 53279771

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCCTCAATT

Flanking Amino Acid:

SEDLKTDIDKEKIKFLLEEL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

78.6

0.71

78.6

Major PPT

84.4

0.77

0.9

35.4

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

82.5

1.1

1.3

96.5

28.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489