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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53286795_53287377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53286795 - 53287377

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAAAG

Flanking Amino Acid:

PVQLSPVAEQDMLFGEVTGS

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

100

1.24

0.5

100

Major PPT

78.8

0.65

79.8

31.1

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

70.4

0.5

1.8

78.39

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047517

53282041 - 53298830

16790

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489