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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53292127_53292968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53292127 - 53292968

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAAAT

U12 Branch Point Sequence:

TGTGCCTTATAG

Flanking Amino Acid:

VVSEFGVKNKHLAESLLHVI

Intron Amino Acid Position:

1874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

64.9

0.37

1.1

70.9

31.9

Major PPT

75.9

0.58

0.9

69.6

36.9

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

52.8

-0

1.9

61.46

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047517

53282041 - 53298830

16790

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489