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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53295490_53296817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53295490 - 53296817

Intron Length:

1328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTGG

5'SS Class:

major

3'SS Sequence:

CATTTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTCATT

Flanking Amino Acid:

KWDWTHDNVISKVLWPSMDK

Intron Amino Acid Position:

2047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

55.9

43.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.8

75.9

32.3

Minor 5ss

42.3

-0.9

3.1

48.2

Minor BPS

61.3

0.44

1.9

84.41

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047517

53282041 - 53298830

16790

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489