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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53431501_53445674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53431501 - 53445674

Intron Length:

14174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ACTCTCTTACTC

Flanking Amino Acid:

VIDSRGISCRVCKYACHRKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

81.4

0.71

0.8

80.3

31.8

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

0.1

1.6

61.27

38.6

Associated Gene:

Gene:

TNS3

Ensembl Gene ID:

ENSAPLG00000006520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027796

53363789 - 53604329

240541

ENSAPLT00000006831

53363789 - 53604329

240541

ENSAPLT00000040958

53363789 - 53604329

240541