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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53492108_53496732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53492108 - 53496732

Intron Length:

4625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTTTCTGAACA

Flanking Amino Acid:

LKSKHGDNYLVLNLSEKRYD

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

83.8

0.84

73.6

41.8

Major PPT

79.8

0.67

77.5

35.6

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

79.8

0.93

1.2

88.1

28.6

Associated Gene:

Gene:

TNS3

Ensembl Gene ID:

ENSAPLG00000006520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027796

53363789 - 53604329

240541

ENSAPLT00000021857

53441666 - 53604329

162664

ENSAPLT00000006831

53363789 - 53604329

240541

ENSAPLT00000040958

53363789 - 53604329

240541

ENSAPLT00000039692

53476170 - 53605065

128896