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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53535502_53555230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53535502 - 53555230

Intron Length:

19729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCATCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTGTCATCAACA

Flanking Amino Acid:

EVINRNPSQHGSQDDDATVG

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

71.9

0.49

67.1

38.3

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

63.9

0.43

1.8

77.22

39.4

Associated Gene:

Gene:

TNS3

Ensembl Gene ID:

ENSAPLG00000006520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021857

53441666 - 53604329

162664

ENSAPLT00000006831

53363789 - 53604329

240541

ENSAPLT00000040958

53363789 - 53604329

240541

ENSAPLT00000039692

53476170 - 53605065

128896

ENSAPLT00000027796

53363789 - 53604329

240541