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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53555404_53555719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53555404 - 53555719

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CATACTGTAAGT

Flanking Amino Acid:

SLIPLGETKEMAVTCYQDEI

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.47

0.9

62.1

39.8

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

46.2

-0.2

2.3

65.16

45.5

Associated Gene:

Gene:

TNS3

Ensembl Gene ID:

ENSAPLG00000006520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027796

53363789 - 53604329

240541

ENSAPLT00000021857

53441666 - 53604329

162664

ENSAPLT00000006831

53363789 - 53604329

240541

ENSAPLT00000040958

53363789 - 53604329

240541

ENSAPLT00000039692

53476170 - 53605065

128896