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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5364714_5366092_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5364714 - 5366092

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAATTCAG

5'SS Class:

weak_major

3'SS Sequence:

TTTTATAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CTTTTTTGAACT

Flanking Amino Acid:

LGPFNPVRKALFFLDLLFTI

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.4

49.6

46.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

79.8

0.67

0.9

74.4

Minor 5ss

25.5

-2.8

3.8

37.9

40.7

Minor BPS

70.2

0.71

1.4

83.97

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040731

5362715 - 5401695

38981