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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5373356_5373988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5373356 - 5373988

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCGGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

ATTGTCTAAAGT

Flanking Amino Acid:

ILLCGFSSDPNGECPQNYTC

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

75.2

0.57

77.9

36.6

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

50.5

0.1

73.16

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040731

5362715 - 5401695

38981