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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53759013_53804381_F

Intron Information:

Intron Rank:

133811

Intron Class:

major

Intron Phase:

Intron Coordinates:

53759013 - 53804381

Intron Length:

45369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTATCCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

82.8

0.74

0.8

77.1

30.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

75.3

0.87

1.5

88.75

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046184

53758577 - 53805422

46846