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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5391631_5392879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5391631 - 5392879

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

AATTTTATGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AACTTTTTAATT

Flanking Amino Acid:

WCLLDFIIVCSIISISIQLT

Intron Amino Acid Position:

1087

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.3

0.46

1.1

63.5

46.3

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

68.5

0.66

1.1

74.5

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040731

5362715 - 5401695

38981