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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5395659_5398085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5395659 - 5398085

Intron Length:

2427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

TCCCTTTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTCCCTTTACT

Flanking Amino Acid:

SNFNKQRKKISGKDLFLTEE

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.1

62.4

38.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

72.7

0.51

0.8

72.8

30.9

Minor 5ss

39.1

-1.2

3.6

54.9

Minor BPS

78.6

0.98

1.5

94.35

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040731

5362715 - 5401695

38981