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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54072394_54072937_R

Intron Information:

Intron Rank:

142400

Intron Class:

major

Intron Phase:

Intron Coordinates:

54072394 - 54072937

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAACTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTATAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTCTATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

79.8

35.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

81.8

0.72

0.9

78.4

33.4

Minor 5ss

-0.5

2.6

56.8

42.7

Minor BPS

77.3

0.85

1.5

88.36

28.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020168

54072214 - 54077139

4926