Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_54167850_54179569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54167850 - 54179569

Intron Length:

11720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GTTTTTATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAAAG

Flanking Amino Acid:

LFGKFDELATENHCRRIKIL

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.2

0.57

1.1

75.7

37.3

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

64.6

0.32

1.8

73.71

38.2

Associated Gene:

Gene:

ADCY1

Ensembl Gene ID:

ENSAPLG00000001037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048379

54092213 - 54252567

160355

ENSAPLT00000022791

54092213 - 54252567

160355

ENSAPLT00000001092

54092213 - 54252567

160355