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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5429544_5430319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5429544 - 5430319

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATCATG

Flanking Amino Acid:

RALKTISVVPGLKIIVGALI

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

100

1.24

0.5

100

Major PPT

67.4

0.39

0.9

58.8

37.7

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

51.2

-0.1

2.1

67.5

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263