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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5434083_5435026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5434083 - 5435026

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

AMELLQKEQESLAAKGIDIL

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.63

0.9

75.5

38.4

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263