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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5436144_5436689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5436144 - 5436689

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTACTTCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

ATCTCCTTAATC

Flanking Amino Acid:

VMEDPGKGDLQPAVNDESSM

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

75.4

0.57

79.7

32.4

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

81.4

0.97

1.1

80.61

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263