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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54385799_54390697_R

Intron Information:

Intron Rank:

143437

Intron Class:

major

Intron Phase:

Intron Coordinates:

54385799 - 54390697

Intron Length:

4899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGAAGA

5'SS Class:

major

3'SS Sequence:

GTCCCTATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TTGTCCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

68.1

38.6

Major BPS

0.1

59.7

32.6

Major PPT

72.8

0.51

0.8

70.1

35.1

Minor 5ss

27.9

-2.5

2.8

32.3

Minor BPS

59.1

0.36

80.54

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039171

54384705 - 54390711

6007