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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5440981_5442795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5440981 - 5442795

Intron Length:

1815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CAATGACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCATTATTT

Flanking Amino Acid:

LLVMVIGNLVVLNLFIALLL

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

85.7

25.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.4

0.41

62.9

42.8

Minor 5ss

40.8

-1

43.6

Minor BPS

62.4

0.47

1.9

82.24

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263