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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5445623_5448115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5445623 - 5448115

Intron Length:

2493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGTACATTCATT

Flanking Amino Acid:

MKTPEKCFPEGCGRYFRCYK

Intron Amino Acid Position:

1043

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

30.4

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

80.7

0.69

0.8

77.3

30.2

Minor 5ss

41.3

-1

3.3

58.3

46.6

Minor BPS

50.9

0.11

2.1

74.87

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263