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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5448271_5448883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5448271 - 5448883

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTCGTGTA

5'SS Class:

major

3'SS Sequence:

GTTTTGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGACTTTTAAAA

Flanking Amino Acid:

FMILLSSGSLAFEDIHIYKR

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.2

66.4

39.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.9

78.1

40.1

Minor 5ss

31.7

-2.1

3.3

38.1

41.2

Minor BPS

57.6

0.24

1.4

63.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263