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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5449393_5452430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5449393 - 5452430

Intron Length:

3038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

ATTTCCTCCAAG

Flanking Amino Acid:

RALSRFEGMRVVVNALIGAI

Intron Amino Acid Position:

1189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

66.7

0.38

64.3

36.6

Minor 5ss

35.1

-1.7

3.2

40.3

45.3

Minor BPS

49.2

-0.2

2.2

63.65

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263