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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5453440_5455214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5453440 - 5455214

Intron Length:

1775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGCTTTTCATT

Flanking Amino Acid:

IMYAAVDSREKNEQPKMEHS

Intron Amino Acid Position:

1300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.3

73.2

39.3

Major BPS

100

1.24

0.5

100

Major PPT

82.8

0.74

0.8

77.4

31.3

Minor 5ss

-1.6

2.7

44.9

Minor BPS

52.8

0.17

1.7

72.08

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263