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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5456127_5456527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5456127 - 5456527

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCATAACT

Flanking Amino Acid:

KPQKPIPRPLNRYQGFLFDI

Intron Amino Acid Position:

1381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

100

1.24

0.5

100

Major PPT

81.8

0.72

0.8

74.6

36.4

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

0.86

1.5

91.26

31.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010509

5426939 - 5460201

33263