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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5465429_5518257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5465429 - 5518257

Intron Length:

52829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCCTG

5'SS Class:

major

3'SS Sequence:

CTTCTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCCTTCTCATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.2

0.77

0.8

81.5

28.8

Minor 5ss

35.6

-1.6

3.1

39.3

Minor BPS

49.6

0.05

1.8

66.98

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034804

5465146 - 5682914

217769