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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54688922_54708210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54688922 - 54708210

Intron Length:

19289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

TTCCCCCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

AGCTATCTAACT

Flanking Amino Acid:

RRHLPVLLLWVNGLMTLGLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

50.6

47.7

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

77.8

0.62

0.7

69.7

Minor 5ss

31.4

-2.1

30.3

42.8

Minor BPS

49.9

0.08

1.9

68.92

41.6

Associated Gene:

Gene:

RAMP3

Ensembl Gene ID:

ENSAPLG00000023187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047230

54683075 - 54708262

25188

ENSAPLT00000042390

54651832 - 54708262

56431