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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54760637_54762897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54760637 - 54762897

Intron Length:

2261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TCTACTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATT

Flanking Amino Acid:

ARGAAAEEDEESLTKEIDDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.8

76.5

37.4

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

74.1

0.84

1.1

81.14

35.2

Associated Gene:

Gene:

PDIA4

Ensembl Gene ID:

ENSAPLG00000010645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011111

54760540 - 54770220

9681