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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54762052_54762897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54762052 - 54762897

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGAA

5'SS Class:

major

3'SS Sequence:

TCTACTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATT

Flanking Amino Acid:

MSTWLKESLTKEIDDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

68.5

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.8

76.5

37.4

Minor 5ss

36.1

-1.6

3.4

48.5

47.7

Minor BPS

74.1

0.84

1.1

81.14

35.2

Associated Gene:

Gene:

PDIA4

Ensembl Gene ID:

ENSAPLG00000010645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030266

54761789 - 54770205

8417