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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54766571_54767210_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54766571 - 54767210

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTGTGC

5'SS Class:

weak_major

3'SS Sequence:

GTTTGTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTCTAAGCAATT

Flanking Amino Acid:

YDYNGPREKYGIVDYMIEQA

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.1

39.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

78.9

0.65

0.9

72.5

37.8

Minor 5ss

43.4

-0.7

3.1

56.1

43.6

Minor BPS

-0.5

2.4

66.25

44.4

Associated Gene:

Gene:

PDIA4

Ensembl Gene ID:

ENSAPLG00000010645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045012

54764134 - 54770205

6072

ENSAPLT00000030266

54761789 - 54770205

8417

ENSAPLT00000011111

54760540 - 54770220

9681