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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54817465_54837470_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
54817465 - 54837470

Intron Length:
20006

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTATT

5'SS Class:
strong_major

3'SS Sequence:
TTGTCTCTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
GTAGTATTAATA

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86
0.85
0.9
86.9
30.1

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
86.1
0.81
0.8
81.1
30.9

Minor 5ss
35.8
-1.6
2.9
43.1
43.9

Minor BPS
52
0.06
1.7
61.67
38.5

Associated Gene:

Gene:
EZH2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

54816484 - 54872865
56382

54816484 - 54872865
56382