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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54893481_54896300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54893481 - 54896300

Intron Length:

2820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CCTTCCATACAG

Flanking Amino Acid:

QNPVTEYMKKAEARLLEEQR

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

85.1

0.79

0.6

81.6

23.5

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

46.2

-0.4

2.1

53.17

47.2

Associated Gene:

Gene:

CUL1

Ensembl Gene ID:

ENSAPLG00000010478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019589

54875842 - 54907364

31523

ENSAPLT00000010964

54875911 - 54911716

35806

ENSAPLT00000045893

54875911 - 54911208

35298

ENSAPLT00000021174

54875427 - 54911716

36290