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Intron Name: Anas_platyrhynchos_platyrhynchos_2_54975504_54976685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54975504 - 54976685

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

CTAGCATCATCT

Flanking Amino Acid:

GVNRNSAIIGGVIAVVIFTI

Intron Amino Acid Position:

1234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

57.9

0.2

1.4

44.2

Major PPT

84.2

0.77

0.8

83.8

31.2

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

-0.3

2.1

62.24

47.1

Associated Gene:

Gene:

CNTNAP2

Ensembl Gene ID:

ENSAPLG00000010463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010897

54975304 - 55769750

794447