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Intron Name: Anas_platyrhynchos_platyrhynchos_2_55175612_55305093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55175612 - 55305093

Intron Length:

129482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCCTTACAG

Flanking Amino Acid:

CKMSRLLNTPEGNPYTWWVG

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

65.9

42.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

89.6

0.89

0.6

84.1

24.1

Minor 5ss

41.8

-0.9

3.2

55.7

48.5

Minor BPS

0.24

1.9

68.4

44.9

Associated Gene:

Gene:

CNTNAP2

Ensembl Gene ID:

ENSAPLG00000010463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010897

54975304 - 55769750

794447