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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5526117_5529634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5526117 - 5529634

Intron Length:

3518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CTTTATTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCTTGCTTATCT

Flanking Amino Acid:

SETPPWNKYVEYTFTGIYTF

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

35.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

80.9

0.69

0.8

73.2

36.9

Minor 5ss

41.6

-0.9

2.8

51.4

39.2

Minor BPS

63.5

0.5

2.1

83.49

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024623

5493072 - 5682914

189843

ENSAPLT00000012448

5517801 - 5682914

165114

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000043043

5517801 - 5682914

165114

ENSAPLT00000034804

5465146 - 5682914

217769