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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5585495_5587138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5585495 - 5587138

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTGACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TGTTATTTTACT

Flanking Amino Acid:

AVSIITSALEELEESHQKCP

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

60.7

0.24

58.2

42.3

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

0.46

1.8

81.96

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000043043

5517801 - 5682914

165114

ENSAPLT00000034804

5465146 - 5682914

217769

ENSAPLT00000024623

5493072 - 5682914

189843

ENSAPLT00000012448

5517801 - 5682914

165114

ENSAPLT00000048092

5493072 - 5682914

189843