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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5592393_5593821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5592393 - 5593821

Intron Length:

1429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGTCT

5'SS Class:

major

3'SS Sequence:

GTTTTGTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTTCTGTGAACT

Flanking Amino Acid:

NLSVLRSFRLLRVFKLAKSW

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

40.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.6

0.71

0.9

75.8

38.1

Minor 5ss

38.4

-1.3

3.5

53.5

45.7

Minor BPS

49.4

0.04

2.2

73.74

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024623

5493072 - 5682914

189843

ENSAPLT00000012448

5517801 - 5682914

165114

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000043043

5517801 - 5682914

165114

ENSAPLT00000034804

5465146 - 5682914

217769