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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5614707_5628684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5614707 - 5628684

Intron Length:

13978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

AGAAAATAAACC

Flanking Amino Acid:

EQSTFTEMEQEKQLQLRGQR

Intron Amino Acid Position:

1097

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

77.9

38.6

Major BPS

0.3

62.3

30.4

Major PPT

78.4

0.64

0.9

75.3

34.2

Minor 5ss

39.7

-1.2

3.2

56.4

Minor BPS

42.3

-0.6

50.09

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000010095

5490734 - 5682914

192181