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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5628829_5635267_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5628829 - 5635267

Intron Length:

6439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGAA

5'SS Class:

major

3'SS Sequence:

TGTTGACAACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATCT

Flanking Amino Acid:

EPPPPVGQKELDEISLSEGS

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.3

34.5

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

50.1

1.2

47.9

43.5

Minor 5ss

35.3

-1.7

3.4

46.9

48.4

Minor BPS

72.1

0.77

1.8

92.57

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000043043

5517801 - 5682914

165114

ENSAPLT00000034804

5465146 - 5682914

217769

ENSAPLT00000012448

5517801 - 5682914

165114