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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56343866_56383516_F

Intron Information:

Intron Rank:

126209

Intron Class:

major

Intron Phase:

Intron Coordinates:

56343866 - 56383516

Intron Length:

39651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTGAAGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

100

1.12

0.4

100

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

44.9

-0.3

2.4

65.2

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047541

56343302 - 56386062

42761

ENSAPLT00000040600

56342884 - 56386062

43179