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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56391274_56400918_F

Intron Information:

Intron Rank:

133277

Intron Class:

major

Intron Phase:

Intron Coordinates:

56391274 - 56400918

Intron Length:

9645

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTAAACCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTTGTAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.82

1.1

68.3

42.2

Major BPS

84.6

0.86

41.2

Major PPT

66.9

0.38

59.4

40.5

Minor 5ss

23.3

-3.1

3.7

28.9

37.2

Minor BPS

56.6

0.19

2.3

77.35

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043969

56386083 - 56405827

19745

ENSAPLT00000038373

56391063 - 56401020

9958