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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56420508_56421689_R

Intron Information:

Intron Rank:

137523

Intron Class:

major

Intron Phase:

Intron Coordinates:

56420508 - 56421689

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCTATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

86.4

0.82

0.8

82.2

28.6

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

53.9

0.2

1.8

78.24

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035609

56420487 - 56428344

7858