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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5644775_5647899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5644775 - 5647899

Intron Length:

3125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCACTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCAATA

Flanking Amino Acid:

FMILLSSGALAFEDIYLEDR

Intron Amino Acid Position:

1237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.2

0.68

0.9

70.6

40.2

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

54.7

0.14

74.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034804

5465146 - 5682914

217769

ENSAPLT00000024623

5493072 - 5682914

189843

ENSAPLT00000012448

5517801 - 5682914

165114

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000043043

5517801 - 5682914

165114