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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56602988_56603506_R

Intron Information:

Intron Rank:

141181

Intron Class:

major

Intron Phase:

Intron Coordinates:

56602988 - 56603506

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATAAG

5'SS Class:

strong_major

3'SS Sequence:

AATTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CTGTTATGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

76.4

34.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

73.4

0.53

0.9

70.5

40.3

Minor 5ss

-2.4

2.7

32.5

42.4

Minor BPS

44.4

-0.3

1.9

60.93

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039003

56602280 - 56610278

7999