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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5678592_5679073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5678592 - 5679073

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAATG

5'SS Class:

major

3'SS Sequence:

TCCTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGAAT

U12 Branch Point Sequence:

AATTTCCTAACA

Flanking Amino Acid:

KPQKPIPRPLNKYQGFIFDV

Intron Amino Acid Position:

1529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

Major BPS

69.6

0.49

1.4

77.9

34.9

Major PPT

84.6

0.78

0.7

76.9

31.8

Minor 5ss

38.9

-1.2

3.1

51.3

40.2

Minor BPS

66.4

0.51

1.6

75.74

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034804

5465146 - 5682914

217769

ENSAPLT00000024623

5493072 - 5682914

189843

ENSAPLT00000012448

5517801 - 5682914

165114

ENSAPLT00000048092

5493072 - 5682914

189843

ENSAPLT00000010095

5490734 - 5682914

192181

ENSAPLT00000043043

5517801 - 5682914

165114