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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56819145_56860820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56819145 - 56860820

Intron Length:

41676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TTCTGCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTACTCTGCACT

Flanking Amino Acid:

ECSLIYLLQPGKHKLRVDTG

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

80.1

0.68

0.9

73.8

35.4

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

51.4

0.12

1.9

75.08

41.2

Associated Gene:

Gene:

TPK1

Ensembl Gene ID:

ENSAPLG00000002852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037214

56668446 - 56924039

255594

ENSAPLT00000019322

56610690 - 56924039

313350

ENSAPLT00000018857

56709905 - 56924039

214135

ENSAPLT00000002899

56639031 - 56924039

285009