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Intron Name: Anas_platyrhynchos_platyrhynchos_2_56860933_56923920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56860933 - 56923920

Intron Length:

62988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTACCACTAAGC

Flanking Amino Acid:

VTTTGLKWNLTNQVLKFGTL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

43.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

35.8

-1.6

2.9

46.9

42.5

Minor BPS

43.9

-0.4

2.1

56.11

41.2

Associated Gene:

Gene:

TPK1

Ensembl Gene ID:

ENSAPLG00000002852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019322

56610690 - 56924039

313350

ENSAPLT00000018857

56709905 - 56924039

214135

ENSAPLT00000002899

56639031 - 56924039

285009

ENSAPLT00000037214

56668446 - 56924039

255594