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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5703891_5705594_F

Intron Information:

Intron Rank:

137300

Intron Class:

major

Intron Phase:

Intron Coordinates:

5703891 - 5705594

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTATT

5'SS Class:

major

3'SS Sequence:

TCTGTTAAGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTGTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

36.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

65.8

0.36

1.1

62.1

42.5

Minor 5ss

36.6

-1.5

3.1

51.4

45.2

Minor BPS

58.6

0.35

80.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036109

5703781 - 5706879

3099